Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905879.1_cds_XP_016456146.1_50011
CDS Infomation

[gene=LOC107780142] [db_xref=GeneID:107780142] [protein=glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic] [protein_id=XP_016456146.1] [location=complement(join(33183..33685,33778..34022,34740..35041,35924..36037,36151..36192))] [gbkey=CDS]
Sequence

ATGGCTTCGGCTGCTCTCTCAGTAGCCAACTCTTCTCTTCAGGTCAGCAACAAAGGATTC
TCTGAATTCTCAGGGCTGCGCACCTCATCAGCTATTCCATTCGGAAGGAAAACTAACGAT
GACTTGCTCTCTGTTGTTGCCTTTCAAACCTCTGTTATTGGAGGAGGGAACAGCAAGAGG
GGAGTAGTGGAGGCCAAGTTGAAAGTGGCAATCAATGGATTTGGAAGAATTGGGAGGAAT
TTCTTGAGGTGTTGGCATGGTAGGAAAGACTCTCCCCTTGATGTCATTGCCATCAATGAC
ACTGGTGGTGTCAAGCAAGCCTCTCACCTTCTTAAATATGACTCCACCCTTGGCATCTTT
GATGCTGATGTCAAGCCCGTCGGCACTGACGGCATCTCCGTCGACGGAAAAGTCATCCAA
GTCGTCTCCGATCGCAACCCCGTCAACCTCCCCTGGGGAGATCTTGGGATTGACTTGGTG
ATAGAAGGTACCGGAGTGTTTGTCGACAGAGAAGGCGCCGGAAAACACATTCAGGCTGGA
GCCAAGAAGGTGCTCATCACCGCTCCCGGAAAAGGTGACATCCCCACATATGTTGTTGGT
GTCAATGCTGATCTCTACAACCCTGATGAACCTATCATCAGCAATGCCTCTTGCACCACC
AACTGCCTTGCTCCTTTTGTCAAGGTTCTTGACCAAAAATTCGGCATTATCAAGGGAACC
ATGACAACTACTCACTCTTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACAGGGAC
CTTAGACGTGCACGAGCTGCAGCCCTCAACATCGTTCCAACCTCAACTGGTGCTGCTAAG
GCCGTGGCCCTTGTCCTCCCAAGCCTTAAGGGGAAGCTCAATGGCATTGCCCTCCGTGTG
CCAACCCCTAACGTCTCGGTCGTTGACCTTGTCGTCCAAGTCTCCAAGAAGACATTTGCT
GAGGAAGTGAATGCTGCATTTAGGGAGGCTGCTGACAAGGAGCTCAAAGGCATTCTCGAT
GTCTGCGATGAACCACTCGTGTCAGTCGACTTCCGGTGCAGTGATGTGTCATCAACTGTT
GATGCTTCACTTACTATGGTCATGGGAGATGACATGGTTAAGGTTATTGCTTGGTATGAC
AATGAATGGGGTTACTCACAGAGGGTGGTTGATCTTGCTGACATTGTTGCAAACCAGTGG
AAATGA

Peptide Sequence

PEP ID

XP_016456146.1
PEP Infomation

PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [Nicotiana tabacum]
Sequence

MASAALSVANSSLQVSNKGFSEFSGLRTSSAIPFGRKTNDDLLSVVAFQTSVIGGGNSKR
GVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIF
DADVKPVGTDGISVDGKVIQVVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAG
AKKVLITAPGKGDIPTYVVGVNADLYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGT
MTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPSLKGKLNGIALRV
PTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTV
DASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQWK

Transcript Sequence

Gene sequence data has not been registered.